If you’re looking for a simple, satisfying breakfast or snack that’s packed with protein and tastes like your favorite bakery-style bagel, these High-Protein Gluten-Free Everything Bagel Bites are about to become a staple in your kitchen.
Made with a combination of Greek yogurt, gluten-free flour, almond flour, and melty mozzarella cheese, these soft and chewy bagel bites come together with minimal effort and deliver all the savory everything bagel flavor you love.
Unlike traditional bagels that can be time-consuming to make, these bite-sized versions skip the yeast and boiling process altogether. The Greek yogurt creates a tender texture while adding an extra boost of protein, making them perfect for busy mornings, meal prep, or an afternoon snack. Pair them with cream cheese, enjoy them alongside eggs and fruit, or use them as mini sandwich buns for a fun twist.
The best part? They’re gluten-free, easy to customize, and made with simple ingredients you likely already have on hand. Whether you’re feeding your family or prepping grab-and-go breakfasts for the week, these everything bagel bites are guaranteed to disappear fast.
Why You’ll Love This Recipe
- High in protein thanks to Greek yogurt and mozzarella cheese
- Gluten-free and made with simple pantry staples
- No yeast or boiling required
- Great for meal prep and freezer-friendly
- Perfect for breakfast, snacks, or mini sandwiches
- Soft, cheesy, and packed with everything bagel flavor
Ingredients
- 1 cup plain non-fat Greek yogurt
- 1 cup gluten-free 1:1 baking flour
- 1/2 cup almond flour
- 2 tsp baking powder
- 1/2 tsp sea salt
- 1 cup shredded part-skim mozzarella cheese
- 1 large egg, beaten (for brushing the tops)
- 1–2 tbsp everything bagel seasoning
Directions
- Preheat your oven to 375°F (190°C) and line a baking sheet with parchment paper.
- In a large mixing bowl, whisk together the gluten-free flour, almond flour, baking powder, and sea salt.
- Add the Greek yogurt and shredded mozzarella cheese. Mix until a dough forms. If the dough is too sticky to handle, add an additional 1–2 tablespoons of gluten-free flour.
- Divide the dough into 11 equal portions and roll each portion into a smooth ball using lightly floured hands.
- Arrange the bagel bites on the prepared baking sheet, leaving a little space between each one.
- Brush the tops with the beaten egg and generously sprinkle with everything bagel seasoning.
- Bake for 25 minutes, or until the bagel bites are puffed and golden brown.
- Allow them to cool for 5–10 minutes before serving.
Storage Tips
- Refrigerator: Store leftovers in an airtight container for up to 4 days.
- Freezer: Freeze in a freezer-safe bag or container for up to 2 months.
- To Reheat: Warm in a 350°F oven or air fryer for 3–5 minutes until heated through.
Approximate Macros (Per Bagel Bite)
- Calories: 107
- Protein: 7g
- Carbohydrates: 9g
- Fat: 5g
Macros are estimates and may vary depending on the specific brands used.
Frequently Asked Questions
Can I use full-fat Greek yogurt?
Yes! Full-fat or 2% Greek yogurt will work well. The dough may be slightly softer, so you may need a touch more flour.
Can I make these dairy-free?
Because both Greek yogurt and mozzarella contribute significantly to the texture and protein content, dairy-free substitutions haven’t been tested in this recipe.
What should I serve with these?
These bagel bites are delicious with cream cheese, mashed avocado, scrambled eggs, turkey slices, or simply enjoyed on their own.
Whether you’re trying to increase your protein intake, need an easy gluten-free breakfast option, or simply love everything bagel flavors, these High-Protein Gluten-Free Everything Bagel Bites are a recipe you’ll find yourself making again and again.
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High-Protein Gluten-Free Everything Bagel Bites
Ingredients
Method
- Preheat your oven to 375°F (190°C) and line a baking sheet with parchment paper.
- In a large mixing bowl, whisk together the gluten-free 1:1 flour, almond flour, baking powder, and sea salt.
- Add the Greek yogurt and shredded mozzarella cheese. Stir until a shaggy dough forms. If the dough is very sticky, add an additional 1–2 tablespoons gluten-free flour until it’s easy to handle.
- Divide the dough into 11 equal portions and roll each portion into a smooth ball using lightly floured hands.
- Place the dough balls onto the prepared baking sheet, spacing them about 2 inches apart.
- Brush the tops with the beaten egg or roll them in the egg wash and generously sprinkle with everything bagel seasoning.
- Bake for 22-25 minutes depending on size or until the bagel bites are puffed, golden on top, and cooked through.
- Allow them to cool for 5–10 minutes before serving.
Notes
Calories: ~107
Protein: ~7 g
Carbohydrates: ~9 g
Fat: ~5 g
