gluten-free high-protein pizzas (so easy & delicious!)
if you’ve ever wanted a quick, protein-packed homemade pizza that’s gluten-free and made with simple, wholesome ingredients, this recipe is for you!
these mini margherita-style pizzas have the perfect balance of crunch, chew, and fresh flavors while being incredibly easy to make.
what do they taste like?
these aren’t your typical fluffy, yeasted pizza crusts—but that’s what makes them special!
since they’re made with just gluten-free flour, non-fat greek yogurt, olive oil, and seasoning, the texture is naturally a little different.
the outside bakes up golden and crisp, while the inside stays soft and slightly chewy.
they hold up beautifully to toppings and have a subtle savory flavor that pairs perfectly with classic ingredients like tomato sauce, fresh mozzarella, basil, and juicy tomato slices.

these pizzas are packed with protein!
thanks to the non-fat greek yogurt in the crust, each pizza packs around 27g of protein, making this a great option for a satisfying meal.
it’s rare to find a pizza crust that’s naturally high in protein while being gluten-free, but this one delivers!
plus, the fresh mozzarella adds even more protein and delicious creaminess.
vegan substitutions:
- use a thick plant-based greek-style yogurt like cocojune (avoid runny yogurts, or the dough will be too sticky).
- swap the fresh mozzarella for vegan mozzarella (miyoko’s, violife, or follow your heart work great).
- add nutritional yeast (1 tbsp) to the dough for a little extra savory flavor.
if your yogurt is thinner, you can thicken it by straining it through a cheesecloth or adding a little extra gluten-free flour until the dough is easy to work with.
the texture will still be crisp on the outside and soft on the inside, just like the original!

customize your toppings!
while the classic margherita-style toppings are amazing, you can easily switch things up:
- add veggies like mushrooms, spinach, or roasted red peppers
- try a different cheese like dairy-free mozzarella, feta, or parmesan
- make it extra hearty with plant-based sausage or chickpeas
- go spicy with a sprinkle of chili flakes or a drizzle of hot honey
how to make them
these pizzas are made in three easy steps:
- mix & knead the dough – just stir together the flour, greek yogurt, olive oil, and seasoning. knead it lightly until smooth.
- pre-bake the crust – shape into three small pizzas and bake at 400°f for 10 minutes, then flip and bake another 5 minutes. this helps the crust get that crisp, chewy texture.
- add toppings & finish baking – spread on the tomato sauce, fresh mozzarella, and tomato slices, then bake for 10 more minutes until melty and golden.

how to store & reheat
if you have leftovers (which is unlikely!), store them in an airtight container in the fridge for up to 3 days.
to reheat, pop them in the oven at 375°f for about 5 minutes or air fry them for a couple of minutes until warmed through.
whether you’re looking for a high-protein pizza alternative, a quick weeknight dinner, or just a fun gluten-free recipe to try, these mini pizzas are a must-make.
they’re crunchy, chewy, cheesy, and so satisfying! 🍕✨
if you like Healthy and Easy Gluten-Free High Protein Pizzas, you’ll also love these other recipes of mine!
Quick and Easy Farro Chickpea Salad with Vegan Feta Crumbles
Spaghetti Squash Enchilada Casserole (Higher-Protein, Plant-Based & Delicious)
Plant-Based Protein Chickpea Salad Wraps (Dairy-Free & Delicious!)
Creamy and Nourishing High Protein Green Glow Soup
Protein-Packed Roasted Sweet Potatoes With Lentil, Chickpea & Edamame Salad
Budget-Friendly Plant-Based Creamy Stewed Butter Beans
Plant Powered Protein Crispy Rice Salad
Comforting French Onion Soup Protein Pasta Bake
Low Carb Pizza Cauliflower Steaks
No-Reheat Sweet Potato and Tofu Wraps with Spicy Brown Mustard Hummus
Nourishing Spinach and Mushroom Curry Orzo Bake
Low Carb Plant Based Protein-Packed Lasagna
The Best Vegan Tortilla Soup – Creamy and Protein-Packed
Lower Carb Cacio e Pepe Spaghetti Squash Bake
Veggie and Protein Packed Salad with Spiced Peanut Dressing

are you going to make my Healthy and Easy Gluten-Free High Protein Pizzas!?
if you make one of my recipes, i would LOVE to see your creation! be sure to leave a review in the comments section, it is so appreciated and helps my small business.
also, you can follow upbeetandkaleingit on Instagram, Pinterest, and Facebook for more vegan recipes!
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Healthy and Easy Gluten-Free High Protein Pizzas
Recipe by MaryCourse: Snacks3
servings15
minutes25
minutes445
kcalAPPROXIMATE MACROS PER PIZZA (3 pizzas)
calories: ~445 kcal
protein: ~27g
carbs: ~55.5g
fat: ~16.5g
Ingredients
pizza crust:
1 1/2 cups gluten-free baking flour (more as needed for dusting)
1 cup greek yogurt (plain, full-fat works best)
1 tbsp olive oil
1/2 tsp salt
1/2 tsp garlic powder (optional, for flavor)
1/2 tsp dried oregano or italian seasoning (optional)
1 tsp baking powder (for a little lift)toppings:
1/2 cup tomato sauce (or crushed tomatoes with a pinch of salt and olive oil)
6 oz fresh mozzarella, torn into small pieces
1 small tomato, thinly sliced
fresh basil leaves (added after baking)
drizzle of olive oil
pinch of salt & black pepper
Directions
- preheat the oven to 400°f. mix the dough – in a bowl, combine the gluten-free flour, salt, baking powder, and any seasonings. stir in the greek yogurt and olive oil. mix until a dough forms.
- knead – lightly flour a surface with gluten-free flour and knead the dough for a minute or two until smooth. if it’s too sticky, add a little more flour. divide – split the dough into 3 equal pieces.
- shape – roll out each portion into a small pizza round or press it out with your hands. pre-bake the crusts: place them on a parchment-lined baking sheet and bake for 10 minutes. remove from the oven, flip them over, and bake for another 5 minutes.
- add toppings: spread a thin layer of tomato sauce over each crust, then evenly distribute the fresh mozzarella and tomato slices. bake again: return to the oven and bake for 10 more minutes, until the cheese is melted and slightly golden.
- finish & serve: top with fresh basil, a drizzle of olive oil, and a pinch of salt and black pepper. enjoy warm!


